Computational Biology Research Camp for High School Students
Nucleotide sequences and structures
Overview: This camp introduces bioinformatics and computational modeling tools in the context of disease research. In the emerging era of medical genomics, we envision gene-literate American citizenry. This camp will provide a starting point for such gene-literacy. Lunch is included in the fee. Bring your laptops.
miRcore high school volunteers in the area have been founding GIDAS (pronounce: guide-us; Genes in Diseases and Symptoms) school club; this camp provides basic knowledge towards miRcore volunteer qualification.
DATE: February 6, 2015
CAMP TIME: 9:30 am – 1:30 pm
LOCATION: Room 1670 Bob and Betty Beyster Building, University of Michigan, 2260 Hayward Street, Ann Arbor, MI 48109
FEE: $50 (Online option available.)
MAIN TARGETS: high school students (young women and men) who are interested in computer, math, biology, and medicine.
OPEN miRcore volunteer meeting TIME: 2:00 pm – 4:00 pm
All campers are invited to attend the following miRcore volunteer meeting in the same room.
2:00 – 3:00 pm: R basics and graph
3:00 – 3:30 pm: GIDAS and committee presentation
3:30 – 4:00 pm: UM GIDAS workshop “Mental and Physical Health”
Sponsor: Women In Science and Engineering (WISE) 
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You will receive email confirmation of the registration and payment. |
Goals
- Expose high school students to the emerging era of medical genomics, when all doctors must be well-acquainted with genetic discoveries, technologies, and applications.
- Give high school students an opportunity to enjoy science. (Hear one student talking about it at TEDxYouth.)
- Support GIDAS (Genes In Diseases And Symptoms) club members in acquiring in-depth knowledge in the field.
- Provide high school students tools for Science Fair projects.
- Encourage high school students to present at the 2016 Research Conference and publish an abstract.
- Encourage high school students to write a research paper in the Jounal of Emerging Investigators.
- Activated NF-κB Pathway in an Irf6-Deficient Mouse Model for Van der Woude Syndrome. Sanika S. Kulkarni(1), Jungwoo Chang(2), and Inhan Lee(3):(1) Pioneer High School, (2) Huron High School, (3) miRcore, Ann Arbor, MI.
- Transcriptional Regulators are Upregulated in the Substantia Nigra of Parkinson’s Disease Patients. Marianne Cowherd(1) and Inhan Lee(2): (1)Community High School, (2)miRcore, Ann Arbor, MI.
Tentative Agenda
| 9:30 am – 10:00 am | DNA and Lung Cancer Basics of DNA, Known genes associated with lung cancer Goal: understand DNA and their changes linked to lung cancer. |
| 10:00 am – 11:00 am | UCSC Genome Browser Single Nucleotide Polymorphism (SNP), Transcription, Splicing, TranslationOnline resource to obtain sequences of each gene region: exon, intron, UTR, CDS Goal: be able to get nucleotide sequences of the genes of interest |
| 11:00 am- 11:30 am | BLAST Gene mapping, Sequence comparison Goal: be able to find genes or organisms from nucleotide sequences |
| 11:30 am – noon | Grab lunch |
| noon – 12:30 pm | Solve ProblemsSequence related problems in lung cancer Goal: explore problems her/his own way |
| 12:30 pm – 1:30 pm | DNA and RNA StructuresRCSB PDB, Mfold Goal: understand DNA structures and RNA folding |
